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2010, Journal of Biotechnology
2013 •
Plant Molecular Biology Reporter
Phylogenetic Analyses of Teleki Grapevine Rootstocks Using Three Chloroplast DNA Markers2013 •
Theoretical and Applied Genetics
Large-scale parentage analysis in an extended set of grapevine cultivars (Vitis vinifera L.)2013 •
In ancient DNA (aDNA) research, evolutionary and archaeological questions are often investigated using the genomic sequences of organelles: mitochondrial and chloroplast DNA. Organellar genomes are found in multiple copies per living cell, increasing their chance of recovery from archaeological samples, and are inherited from one parent without genetic recombination, simplifying analyses. While mitochondrial genomes have played a key role in many mammalian aDNA projects, including research focused on prehistoric humans and extinct hominins, it is unclear how useful plant chloroplast genomes (plastomes) may be at elucidating questions related to plant evolution, crop domestication, and the prehistoric movement of botanical products through trade and migration. Such analyses are particularly challenging for plant species whose genomes have highly repetitive sequences and that undergo frequent genomic reorganization, notably species with high retrotransposon activity. To address this question, we explored the research potential of the grape (Vitis vinifera L.) plastome using targeted-enrichment methods and high-throughput DNA sequencing on a collection of archaeological grape pip and vine specimens from sites across Eurasia dating ca. 4000 BCEe1500 CE. We demonstrate that due to unprecedented numbers of sequence insertions into the nuclear and mitochondrial genomes, the grape plastome provides limited intraspecific phylogenetic resolution. Nonetheless, we were able to assign archaeological specimens in
Critical reviews in biotechnology
Plant variety and cultivar identification: advances and prospects2013 •
Plant variety and cultivar identification is one of the most important aspects in agricultural systems. The large number of varieties or landraces among crop plants has made it difficult to identify and characterize varieties solely on the basis of morphological characters because they are non stable and originate due to environmental and climatic conditions, and therefore phenotypic plasticity is an outcome of adaptation. To mitigate this, scientists have developed and employed molecular markers, statistical tests and software to identify and characterize the required plant cultivars or varieties for cultivation, breeding programs as well as for cultivar-right-protection. The establishment of genome and transcriptome sequencing projects for many crops has led to generation of a huge wealth of sequence information that could find much use in identification of plants and their varieties. We review the current status of plant variety and cultivar identification, where an attempt has b...
BMC Plant Biology
Patterns of sequence polymorphism in the fleshless berry locus in cultivated and wild Vitis vinifera accessions2010 •
2007 •
Australian Journal of Grape and Wine Research
Structural dynamics at the berry colour locus in V itis vinifera L. somatic variants2014 •
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Theoretical and Applied Genetics
High-throughput SNP discovery and genotyping in durum wheat (Triticum durum Desf.)2011 •
2008 •
Molecular Biotechnology
Clones Identification and Genetic Characterization of Garnacha Grapevine by Means of Different PCR-Derived Marker Systems2011 •
BMC Plant Biology
A small XY chromosomal region explains sex determination in wild dioecious V. vinifera and the reversal to hermaphroditism in domesticated grapevines2014 •
Theoretical and Applied Genetics
The SSR-based molecular profile of 1005 grapevine (Vitis vinifera L.) accessions uncovers new synonymy and parentages, and reveals a large admixture amongst varieties of different geographic origin2010 •
Theoretical and Applied Genetics
Candidate loci for phenology and fruitfulness contributing to the phenotypic variability observed in grapevine2013 •
Theoretical and Applied Genetics
Genomic amplification of the Gret1 retroelement in white-fruited accessions of wild Vitis and interspecific hybrids2008 •
… Journal of Enology …
ASEV Honorary Research Lecture 2007: Beyond the Genome, Opportunities for a Modern Viticulture: A Research Overview2008 •
2015 •
Tree Genetics & Genomes
Genetic linkage maps of two interspecific grape crosses (Vitis spp.) used to localize quantitative trait loci for downy mildew resistance2011 •
Genetic Resources and Crop Evolution
EST-SSR markers reveal synonymies, homonymies and relationships inconsistent with putative pedigrees in chestnut cultivars2013 •
Tree Genetics & Genomes
Retrotransposon-based molecular markers for grapevine species and cultivars identification2010 •
BMC Plant Biology
Identification of new polymorphic regions and differentiation of cultivated olives (Olea europaea L.) through plastome sequence comparison2010 •
2010 •
2007 •
Grapevine Molecular Physiology & Biotechnology
Molecular Maps, Qtl Mapping & Association Mapping In Grapevine2009 •
Vitis Journal of Grapevine Research
Malvasia nera di Brindisi/Lecce' grapevine cultivar (Vitis vinifera L.) originated from 'Negroamaro' and 'Malvasia bianca lunga2008 •
2007 •
Genetic Resources and Crop Evolution
Portuguese traditional grapevine cultivars and wild vines (Vitis vinifera L.) share morphological and genetic traits2009 •
BMC Plant Biology
Haplotype diversity of VvTFL1A gene and association with cluster traits in grapevine (V. vinifera)2014 •
Journal of Agricultural and Food Chemistry
Toward the Authentication of Wines of Nemea Denomination of Origin through Cleaved Amplified Polymorphic Sequence (CAPS)-Based Assay2008 •
Pesquisa Agropecuária Brasileira
Molecular characterization of grapevine from Santa Catarina, Brazil, using microsatellite markers